Test Directory

Test Code
5249
Test Name
Brittle Cornea Syndrome NGS Panel
CPT Codes
81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Alternate Names
BCS; BCS1; BCS2
Description

Brittle cornea syndrome 1 (BCS1; MIM 229200) and brittle cornea syndrome 2 (BCS2; MIM 614170) are autosomal recessive disorders caused by mutations in the zinc finger 469 (ZNF469) and PR domain-containing protein 5 (PRDM5) genes, respectively. Major features of BCS include spontaneous rupture of the cornea or rupture of the cornea following minor trauma, keratoglobus, keratoconus, blue sclera, joint hypermobility, scoliosis, hip dysplasia, hyperelasticity of the skin, dentinogenesis imperfecta and mixed conductive and sensorineural hearing loss. BCS is progressive and often leads to blindness. Some affected individuals have also been reported to have an increased proclivity to fractures. BCS shares many features with Ehlers-Danlos syndrome, kyphoscoliotic type, 1 (EDSKSCL1; MIM 225400). However, individuals with EDS VI are biochemically characterized by deficient collagen lysyl hydroxylase activity while individuals with BCS have normal lysyl hydroxylase activity.

Testing Schedule
Monday-Friday
Genes
PRDM5, ZNF469
Disease Group
Connective Tissue, Ophthalmology