Test Directory

Test Code
1491
Test Name
Campomelic Dysplasia
CPT Codes
81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Alternate Names
CMPD; ACMPD
Description

Campomelic dysplasia (CMPD; MIM 114290) is an autosomal dominant skeletal dysplasia characterized by shortening and angular bowing of the long bones, hypoplastic scapulae, 11 pairs of ribs, lack of mineralization of thoracic pedicles, cervical spine and pelvic malformations, clubfeet and Pierre Robin sequence. Tracheobronchomalacia causes respiratory problems that often lead to death during the neonatal period. Acampomelic campomelic dysplasia (ACMPD) is a variant of campomelic dysplasia that lacks the angular deformities of the long bones.  Sex reversal or gradations of genital defects occur in about 65% to 75% of individuals with a 46, XY karyotype. CMPD and ACMPD are caused by mutations in SOX9. The SOX proteins are a group of transcription factors that are characterized by the presence of a DNA-binding motif known as the high mobility group (HMG) domain. Members of this group play a diverse role during embryonic development and several are associated with human disease. The majority of the SOX9 mutations (about 90% to 95%) consist of missense, non-sense and splice site mutations, and small exonic deletions or insertions. Some cases of CMPD or ACMPD are caused by chromosome 17 rearrangements remote from SOX9. Breakpoints associated with CMPD or ACMPD have been detected up to 1Mb 5%u2019 or 3%u2019 from the gene. The implication is that remote rearrangements involving chromosome 17 affect cis-acting elements involved in regulation of SOX9. In general, the more remote the chromosome 17 rearrangement is from the SOX9 gene, the less severe the phenotype. The rearrangements and large deletions constitute about 5% to 10% of the mutations.

Testing Schedule
Monday-Friday
Genes
SOX9
MIM
114290
Disease Group
Dysmorphology, Skeletal Disorders