Test Directory

Test Code
2237
Test Name
Cholestasis, Benign Recurrent Intrahepatic, 2
CPT Codes
81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Alternate Names
BRIC2
Description

Mutations in the ATP8B1 gene cause two autosomal recessive disorders affecting liver: cholestasis, benign recurrent intrahepatic, 1 (BRIC1), cholestasis, progressive familial intrahepatic, 1 (PFIC1) and one autosomal dominant disorder: cholestasis, intrahepatic, of pregnancy, 1 (ICP1). BRIC2 is caused by mutations in the ABCB11 gene. PFIC can be caused by mutations in three other genes: ABCB11 (PFIC2), ABCB4 (PFIC3) and TJP2 (PFIC4). Mutations in the ABCB4 gene have been reported in ICP3. BRIC is characterized by intermittent episodes of cholestasis without extrahepatic bile duct obstruction. PFIC is characterized by early onset of cholestasis that progresses to hepatic fibrosis, cirrhosis, and end-stage liver disease before adulthood. ICP typically occurs in the third trimester and it recurs in 45 to 70% of subsequent pregnancies. Findings include pruritus, jaundice, increased serum bile salts, and abnormal liver enzymes. This condition is reversible, but it can result in fetal complications including premature labor, placental insufficiency and intrauterine death. Extrahepatic findings are not usually present in any of the conditions. However, a patient with clinical findings consistent with Alagille syndrome (ALGS, ATP8B1 related) was found to have compound heterozygous mutations in ATP8B1.

Gene

Disorder

MIM

Inheritance

ABCB11

Cholestasis, benign recurrent intrahepatic, 2 (BRIC2)

Cholestasis, progressive familial intrahepatic, 2 (PFIC2)

605479

601847

AR

AR

Testing Schedule
Monday-Friday
Genes
ABCB11
MIM
605479
Disease Group
Liver