Test Directory

Test Code
2408
Test Name
Neutropenia, Severe Congenital, X-linked
CPT Codes
81406, 81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Description

Wiskott-Aldrich syndrome (WAS; MIM 301000) is an X-linked recessive disorder associated with combined immunodeficiency, thrombocytopenia, eczema, recurrent infections and increased susceptibility for malignancies and autoimmune disorders. Wiskott-Aldrich syndrome is caused by mutations in the WAS gene, which encodes Wiskott-Aldrich syndrome protein. Mutations in the WAS gene can also cause thrombocytopenia 1 (THC1; MIM 313900) and neutropenia, severe congenital, X-linked (SCNX; MIM 300299). THC1 and SCNX are clinically milder than Wiskott-Aldrich syndrome. THC1 is nonsyndromic thrombocytopenia characterized by decreased numbers of platelets and bleeding tendency. Patients with SCNX have severe congenital neutropenia, low to low-normal platelet count and normal mean platelet volume.

Testing Schedule
Monday-Friday
Genes
WAS
Disease Group
Hematological