Test Directory

Test Code
1595
Test Name
Omodysplasia NGS Panel
CPT Codes
81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Alternate Names
OMOD1
Description

Omodysplasia 1 (OMOD1; MIM 258315) is a congenital, autosomal recessive rhizomelic dysplasia.  It is characterized by proximal shortening and distal tapering of the humeri and femora. Some other skeletal findings may include limited flexion or extension of the elbows and knees, hypoplasia of the distal humeri, radioulnar diastasis, anterior lateral dislocation of the radial head, hypoplastic everted lateral condyle, proximal club shaped femurs, short and thick tibiae and fibulae.  Facial anomalies include frontal bossing, small nose with a depressed nasal bridge, flat face, micrognathia, and long philtrum. Some individuals have been described with congenital heart defects, cryptorchidism, umbilical hernia, and cognitive delay. Autosomal recessive omodysplasia is caused by loss of function mutations in the glypican 6 gene (GPC6). Autosomal dominant omodysplasia is caused by loss of function mutations in the FZD2 gene. The phenotype of the autosomal dominant form overlaps with OMOD1, but is generally less severe. The autosomal dominant form is mainly characterized by short upper limbs, short metacarpals, and facial dysmorphism. Short first metacarpals is not a feature of OMOD1.

Gene Disorder MIM Inheritance
FZD2 Omodysplasia, FZD2 related - AD
GPC6 Omodysplasia 1 (OMOD1) 258315 AR
 
 
 
 
 
Testing Schedule
Monday-Friday
Genes
FZD2, GPC6
Disease Group
Skeletal Disorders