Test Directory

Test Code
2303
Test Name
Schneckenbecken Dysplasia, INPPL1 Related
CPT Codes
81479
Expected Turnaround Time
Typically 2 to 4 weeks from receipt of a sample in the laboratory. All cases involving ongoing pregnancies will be expedited.
Clinical Utility
Genetic analysis to provide a molecular diagnosis of this disorder. Recommended for individuals with a personal and/or family history of this disorder to ensure appropriate treatment and establish recurrence risk for family members.
Specimen and Container Info

Non-Prenatal Specimens

Preferred/Alternate

Specimen Type

Containers

Volume

Preferred Specimen Type

Whole Blood

Lavender Top (EDTA)

3 mL

Alternate Specimen Type

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

Alternate Specimen Type

Fibroblasts

T-25 Flasks

2 confluent T-25 flasks, filled to capacity

Alternate Specimen Type

Saliva (Whole blood is recommended for CNV)

DNA Self-Collection Kit or Oragene Saliva Collection Kit for Young Children

Follow kit instructions (www.dnagenotek.com)

Prenatal Specimens

Either specimen type below is acceptable.

Specimen Type

Containers

Volume

Cultured cells

T-25 Flasks

2 confluent T-25 flasks derived from amnio or CVS samples.

Genomic DNA

1.5 mL Tube

3 µg (at a concentration of at least 30 ng/µl), preferably in TE solution.

NOTE: For specimens from outside of North America, the preferred specimen type is Genomic DNA. HNL Genomics does not recommend shipping whole blood or cultured cells from any location other than the United States, Canada, or Mexico.

Transport Instructions
  • Transport at room temperature within 24 hours.
  • If the specimen cannot be transported to the lab within 24 hours, refrigerate for up to 72 hours.
  • Do not freeze or expose to extreme temperatures, refrigerate for up to 72 hours if cannot be transported to lab within 24 hours. 
Stability Requirements

Room Temperature

24 hours

Refrigerated

72 hours

Causes for Rejection
  • Improperly labeled specimen (minimum of two patient identifiers)
  • Inappropriate specimen type
  • Incomplete or incorrect test request form
  • Insufficient volume
  • Specimen has leaked in transit
  • Specimen without a test order
Methodology
Next Generation Sequencing and Copy Number Variation Analysis
Performing Location
Genomics - Snowdrift
Alternate Names
OPSMD
Description

Opsismodysplasia (OPSMD; MIM 258480) is an autosomal recessive chondrodysplasia caused by mutations in the inositol polyphosphate phosphatase-like 1 gene (INPPL1).  It is generally non-lethal, and is characterized by severe delay in skeletal ossification, short limbs, small hands and feet, severe platyspondyly with hypoplastic vertebral bodies, metaphyseal cupping, squared iliac bones, horizontal acetabular roofs, hypoplastic ischia and pubis. Additional clinical features include narrow, bell shaped thorax, macrocephaly with large fontanelles, frontal bossing, short nose with anteverted nostrils and depressed nasal bridge, long philtrum and abnormally shaped ears. Schneckenbecken dysplasia (MIM 269250) clinically overlaps with OPSMD and it can be caused by mutations in the SLC35D1 or INPPL1 genes. It is an autosomal recessive perinathal lethal chondrodysplasia. The most characteristic radiological finding in Schneckenbecken dysplasia is small ilia with a snail-like appearance.  Primary differential diagnoses include achondrogenesis, type 1A (ACG1A; MIM 200600), metatropic dysplasia (MIM 156530) and thanatophoric dysplasia, type I and II (TD1; MIM 187600 and TD2; MIM 187601). INPPL1 is a phosphatase involved in the regulation of phosphoinositides. INPPL1 also seems to act as a noncatalytic docking protein for cytoskeletal adhesion proteins, phosphatases and tyrosine kinase-associated receptors.

Testing Schedule
Monday-Friday
Genes
INPPL1
MIM
269250
Disease Group
Skeletal Disorders